Job Description P77481 Confidence 99.66% Date Thu Jan 5 12:29:44 GMT 2012 Rank 68 Aligned Residues 125 % Identity 22% Template c1f2uD_ PDB info PDB header:replication Chain: D: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of rad50 abc-atpase Resolution 1.60 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		Y	P	H	M	T	V	Y	D	N	M	A	F	G	L	K	M	Q	K	I	A	K	E	V	I	D	E	R	V	N	W	A	A	Q	I	L	G	L	R	E	Y	L	K	R	K	P	G	A	L	S	G	G	Q	R	Q	.	.	.	.	.	.	R	V	A	L	G	R	A	I	V	R	E	A	G	V	F	L	M	D	E	P
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	K	I	G	E	L	A	S	E	I	F	A	E	F	T	E	G	K	Y	S	E	V	V	V	R	A	E	E	N	K	V	R	L	F	V	V	W	E	G	K	E	R	P	L	T	F	L	S	G	G	E	R	I	A	L	G	L	A	F	R	L	A	M	S	L	Y	L	A	G	E	I	S	L	L	I	L	D	E	P
Template Known Secondary structure																	T	T	T	S	S									S	S	S								T	T					G	G	G	S																				T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		L	S	N	L	D	A	K	L	R	V	Q	M	R	A	E	I	S	K	L	H	Q	K	L	N	T	T	M	I	Y	V	T	H	D	Q	T	E	A	M	T	M	A	T	R	I	V	I	M	.	.	K	D	G	I	V	Q
Query Conservation																																																	.	.
Alig confidence																					.															.													.	.
Template Conservation																					.															.
Template Sequence		T	P	Y	L	D	E	E	R	R	R	K	L	I	T	I	M	E	R	Y	.	L	K	K	I	P	Q	V	I	L	V	S	H	D	E	.	E	L	K	D	A	A	D	H	V	I	R	I	S	L	E	N	G	S	S	K
Template Known Secondary structure			T	T																T	.	G	G	G	S	S							S		G	.	G	G	G	G	G		S	S							S	S	S	S
Template Predicted Secondary structure																					.															.
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.		.	.	.	.	.	.	850	.	.	.	.	.	.	.		.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions