 |
Job Description | P32160 | Confidence | 13.08% | Date | Thu Jan 5 11:49:41 GMT 2012 |
Rank | 3 | Aligned Residues | 49 |
% Identity | 27% | Template | d1eq1a_ |
SCOP info | Apolipophorin-III
| Apolipophorin-III
| Apolipophorin-III
|
Resolution | UNK |
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | Q | F | R | E | D | F | N | S | Q | N | P | S | L | P | L | N | E | F | R | A | I | D | S | S | P | D | K | A | N | L | T | R | A | A | S | K | I | N | E | N | L | Y | A | S | T | . |
. |
. |
. |
. |
A | L | E | R | G | T | L | K | I | K |
Query Conservation |   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . |   |
|   |   |   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|
|
|
|
|   |
|   |
|
Template Sequence |   |
Q | K | T | F | S | E | Q | F | N | S | L | V | N | S | K | N | . |
. |
. |
. |
. |
. |
. |
. |
T | Q | D | F | N | K | A | L | K | D | G | S | D | S | V | L | Q | Q | L | S | A | F | S | S | S | L | Q | G | A | I | S | D | A | N | G | K | A | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
| . | . | . | . | . | . | . | . | S | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|