|   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
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. | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |
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|  |  |  |
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|
| . | . | . |
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|  |  |  |  |  |  |
Query SS confidence |   |
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| . |
. |
. |
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Query Sequence |   |
P | T | C | S | I | S | G | G | K | T | I | E | V | E | F | R | D | L | I | I | D | D | I | N | G | N | Y | G | R | K | E | V | P | Y | E | L | T | C | D | S | T | T | R | H | P | D | W | E | M | T | L | T | W | T | G | T | Q | T | S | F | N | D | A | A | I | . |
. |
. |
E | T | D | V | P | G | F | G | I | E | L | Q |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
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|   |
|   |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . |
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| . |
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| . | . | . |
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Template Conservation |   |
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|   |
|   | . | . |
|   |   |   |   |
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |
| . |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
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|   |
|   |
Template Sequence |   |
G | C | D | V | S | . |
. |
A | R | D | V | T | V | T | L | P | D | Y | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | V | P | I | P | L | T | V | . |
Y | C | A | K | S | Q | N | L | G | Y | Y | L | S | G | T | T | A | D | A | G | N | S | I | F | T | N | T | A | S | F | S | P | A | Q | G | V | G | V | Q | L | T |
Template Known Secondary structure |   |
|
|  |  |  | . | . |  | S |
| S | S |
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| S | S | S | . | . | . | . | . | . | . | . | . | . |
|
|  |  |
|
|  |  |  | . |  |
| S | S |
|  |  |  |  |  |  |  |  | S |
| B |
| S | T | T | S |
| S | B |
|
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| S | S | B |
| S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
| . | . |
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|  |  |  |
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| . | . | . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  | . |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
160 | . | . | . | . | |
|
. | . | . | . | . | 170 | . | . | . | . | . | . | |
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. | . | . | 180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
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|
|  |  |  |  | . |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
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|
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|
| . |
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Query Sequence |   |
H | D | G | Q | R | F | K | L | N | T | P | L | A | I | N | . |
A | T | D | F | T | Q | K | P | K | L | E | A | V | P | V | K | A | S | D | A | V | L | S | D | T | N | F | S | A | Y | A | T | L | R | V | D | Y | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
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|
|
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|
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|
| . |
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| . |
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|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |   |   | . |   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |
|
|
Template Sequence |   |
R | N | G | T | I | I | P | A | N | N | T | V | S | L | G | A | V | G | T | S | A | V | S | L | G | L | T | A | N | Y | A | R | T | G | . |
G | Q | V | T | A | G | N | V | Q | S | I | I | G | V | T | F | V | Y | Q |
Template Known Secondary structure |   |
 | T | T |  |  |
|
| T | T |
|
|  |  |  |  |  |  |
| S | S |
|  |  |
|
|  |  |  |  |  |  |  |
| S | . | S |
|
|
| S | S | B |
|
|
|
|
|  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
|
|
|
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
. | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
  |