Job Description P05827 Confidence 97.22% Date Thu Jan 5 10:58:58 GMT 2012 Rank 80 Aligned Residues 78 % Identity 18% Template d2fbia1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.10

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																		.	.																																				.	.	.	.	.	.	.
Query SS confidence																		.	.																																				.	.	.	.	.	.	.
Query Sequence		M	D	L	R	D	L	K	T	F	L	H	L	A	E	S	R	.	.	H	F	G	R	S	A	R	A	M	H	V	S	P	S	T	L	S	R	Q	I	Q	R	L	E	E	D	L	G	Q	P	L	F	V	R	D	.	.	.	.	.	.	.	N	R	T	V	T	L	T	E	A	G	E	E	L	R	V	F	A	Q	Q	T
Query Conservation																		.	.																																				.	.	.	.	.	.	.
Alig confidence																		.	.																										.	.	.								.	.	.	.	.	.	.
Template Conservation																																													.	.	.
Template Sequence		L	T	E	Q	Q	W	R	V	I	R	I	L	R	Q	Q	G	E	M	E	S	Y	Q	L	A	N	Q	A	C	I	L	R	P	S	M	T	G	V	L	A	R	L	E	R	.	.	.	D	G	I	V	R	R	W	K	A	P	K	D	Q	R	R	V	Y	V	N	L	T	E	K	G	Q	Q	C	F	V	S	M	S	G	D
Template Known Secondary structure																		S										T	T																.	.	.	T	T	S							T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	Y	Q	Q	L	R	H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	K	N	Y	Q	R	I	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions