Job Description P05827 Confidence 85.10% Date Thu Jan 5 10:58:58 GMT 2012 Rank 206 Aligned Residues 199 % Identity 14% Template d1amfa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.75

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																				.							.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.							.	.	.	.	.	.	.	.	.
Query Sequence		G	E	L	H	I	F	C	S	V	T	A	A	Y	S	H	L	P	P	I	L	D	R	F	R	A	E	H	P	S	V	E	I	K	L	T	T	G	D	A	A	D	A	M	E	K	V	V	T	G	E	.	A	D	L	A	I	A	.	.	.	.	.	.	.	.	.	G	K	P	E	T	L	P	G	A	V	A	F	S	M
Query Conservation																																																				.							.	.	.	.	.	.	.	.	.
Alig confidence																	.								.																											.							.	.	.	.	.	.	.	.	.
Template Conservation																	.								.
Template Sequence		G	K	I	T	V	F	A	A	A	S	L	T	N	A	M	.	Q	D	I	A	T	Q	F	.	K	K	E	K	G	V	D	V	V	S	S	F	A	S	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A	I	D	T	A	T	R	Q	T	L
Template Known Secondary structure										G	G	G					.								.																									T				S					S	S										T	T		B		G	G	G
Template Predicted Secondary structure																	.								.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																														.	.	.																											.	.	.	.
Query SS confidence																														.	.	.																											.	.	.	.
Query Sequence		L	E	N	L	A	V	V	L	I	A	P	A	L	P	C	P	V	R	N	Q	V	S	V	E	K	P	D	W	.	.	.	S	T	V	P	F	I	M	A	D	Q	G	P	V	R	R	R	I	E	L	W	F	R	R	N	K	I	.	.	.	.	S	N	P	M	I	Y	A	T	V	G	G	H	E	A	M	V	S	M	V
Query Conservation																														.	.	.																											.	.	.	.
Alig confidence																														.	.	.																											.	.	.	.
Template Conservation
Template Sequence		L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D	V	R	G	A	L	A	L	V	E
Template Known Secondary structure												T	T									S	T	T								T	T								T	T	T														T	T						G	G	G					S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	C	G	V	A	L	L	P	E	V	V	L	E	N	S	P	E	P	V	R	N	R	V	M	I	L	E	R	S	D	E	K	T	P	F	E	L	G	V	C	A	Q	K	K	R	L	H	E	P	L	I	E	A	F	W	K	I	L	P	N
Query Conservation
Alig confidence																		.	.	.																															.
Template Conservation																		.	.	.																															.
Template Sequence		R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	.	.	.	S	K	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	.	A	T	V	K	A	F	Y	D	Y	L	K	G
Template Known Secondary structure		T	T	S	S	S												.	.	.		S	S									G	G	G	S										B	T	T			S	.											T	S
Template Predicted Secondary structure																		.	.	.																															.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions