Job Description P05827 Confidence 73.42% Date Thu Jan 5 10:58:58 GMT 2012 Rank 241 Aligned Residues 87 % Identity 14% Template c3r4kD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution Resolution 2.46 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	G	R	S	A	R	A	M	H	V	S	P	S	T	L	S	R	Q	I	Q	R	L	E	E	D	L	G	Q	P	L	F	V	R	D	N	R	T	V	T	L	T	E	A	G	E	E	L	R	V	F	A	Q	Q	T	L	L	Q	Y	Q	Q	L	R	H	T	I	D	Q	Q	G	P	S	L	S	G	E	L	H	I	F
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		G	L	S	D	L	T	R	L	S	G	X	N	K	A	T	V	Y	R	L	X	S	E	L	Q	E	A	G	.	.	.	F	V	E	Q	V	E	R	S	Y	R	L	G	P	Q	V	L	R	L	A	A	L	R	E	A	S	V	P	I	L	S	A	S	R	R	V	L	R	E	L	S	E	D	T	G	E	T	T	H	L	S
Template Known Secondary structure												S															T	T	.	.	.	S												T	T												S																		S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	V	T	A	A	Y	S	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Q	G	E	Q	L	A	S	L
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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