Job Description P05827 Confidence 99.74% Date Thu Jan 5 10:58:58 GMT 2012 Rank 23 Aligned Residues 203 % Identity 18% Template c3ho7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:oxyr; PDBTitle: crystal structure of oxyr from porphyromonas gingivalis Resolution 1.58 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	L	H	I	F	C	S	V	T	A	A	Y	S	H	L	P	P	I	L	D	R	F	R	A	E	H	P	S	V	E	I	K	L	T	T	G	D	A	A	D	A	M	E	K	V	V	T	G	E	A	D	L	A	I	A	G	K	P	E	T	L	P	G	A	V	A	F	S	M	L	E	N	L	A	V	V	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	R	L	N	I	A	V	L	P	T	I	A	P	Y	L	L	P	R	V	F	P	I	W	K	K	E	L	A	G	L	E	I	H	V	S	E	M	Q	T	S	R	C	L	A	S	L	L	S	G	E	I	D	M	A	I	I	A	S	K	A	E	T	E	G	L	E	D	D	L	L	Y	Y	E	E	F	L	G	Y	V
Template Known Secondary structure											T	T	T																S	T	T																				T	S		S					S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		A	P	A	L	P	C	P	V	R	N	Q	V	S	V	E	K	P	D	W	S	T	V	P	F	I	M	A	D	Q	G	P	V	R	R	R	I	E	L	W	F	R	R	N	K	I	S	N	P	.	M	I	Y	A	T	V	G	G	H	E	A	M	V	S	M	V	A	L	G	C	G	V	A	L	L	P	E	V	V	L	E
Query Conservation																																																		.
Alig confidence									.	.																																								.
Template Conservation									.	.
Template Sequence		S	R	C	E	P	L	F	.	.	E	Q	D	V	I	R	T	T	E	V	N	P	H	R	L	W	L	L	D	E	G	H	C	F	R	D	Q	L	V	R	F	C	Q	M	K	G	L	H	E	R	Q	T	A	Y	S	G	G	S	M	E	A	F	M	R	L	V	E	S	G	Q	G	I	T	F	I	P	Q	L	T	V	E
Template Known Secondary structure			T	T	S	G	G	G	.	.	G	S	S	S	B		G	G	G			G	G	G	B				T	T	T	T	T	T	T	S	T	T					T		T	T	T	T		S	S	S				S												T	T								G	G	G	G	G
Template Predicted Secondary structure									.	.
Template SS confidence
		170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	P	E	P	V	R	N	R	V	M	I	L	E	R	S	D	E	K	T	P	F	E	L	G	V	C	A	Q	K	K	R	L	H	E	P	L	I	E	A	F	W	K	I	L	P	N	H
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		Q	L	S	P	.	.	S	Q	K	E	L	V	R	P	F	G	M	P	R	P	V	R	E	V	R	L	A	V	R	Q	D	Y	S	R	R	K	L	R	E	Q	L	I	G	L	L	R	S	A
Template Known Secondary structure		G	S			.	.				T	T				B		S	S												T	T		S														T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		248	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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