Job Description P05827 Confidence 60.63% Date Thu Jan 5 10:58:58 GMT 2012 Rank 290 Aligned Residues 144 % Identity 12% Template c3cvgC_ PDB info PDB header:metal binding protein Chain: C: PDB Molecule:putative metal binding protein; PDBTitle: crystal structure of a periplasmic putative metal binding protein Resolution 1.97 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.														.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		G	A	V	A	F	S	M	L	E	N	L	A	V	V	L	I	A	P	A	L	P	C	P	V	R	N	Q	V	S	V	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	W	S	T	V	P	F	I	M	A	D	Q	G	P	V	R	R	R	I	E	L	W	F	R	R	N	K	I	S	N	P	M	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		S	E	S	P	S	Y	Y	A	F	R	D	H	F	X	L	I	G	P	P	S	N	P	A	K	L	S	G	D	S	D	I	A	D	X	F	S	K	X	H	D	A	A	E	A	G	N	T	K	P	P	V	R	F	L	S	R	Y	D	K	S	A	T	N	I	K	E	A	E	L	W	L	S	I	G	Q	V	P	W	A	T
Template Known Secondary structure		S																		T	T		T	T				S	S																			S	S	S									S	S													T	T	T			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
							219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																													.	.	.	.
Query SS confidence		.	.	.	.	.																																													.	.	.	.
Query Sequence		.	.	.	.	.	I	Y	A	T	V	G	G	H	E	A	M	V	S	M	V	A	L	G	C	G	V	A	L	L	P	E	V	V	L	E	N	S	P	E	P	V	R	N	R	V	M	I	L	E	.	.	.	.	R	S	D	E	K	T	P	F	E	L	G	V	C	A	Q	K	K	R	L	H	E	P	L	I	E	A	F
Query Conservation		.	.	.	.	.																																													.	.	.	.
Alig confidence		.	.	.	.	.																																													.	.	.	.
Template Conservation
Template Sequence		A	Y	S	T	W	Y	H	Q	Y	I	T	F	P	I	Q	A	L	T	A	A	I	L	L	R	E	Y	T	I	T	D	Y	G	T	Y	L	S	I	P	R	G	L	R	D	Q	X	V	I	Y	K	K	G	T	N	D	A	D	D	P	L	L	N	P	A	H	L	L	V	G	A	R	A	K	N	A	E	X	A	K	E	F
Template Known Secondary structure		S			T	T						S												T	T											T	T	S						T	T									S		T	T		T	T										S	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	I	L	P	N	H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	W	L	V	S	K	E
Template Known Secondary structure						T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions