Job Description P05827 Confidence 99.76% Date Thu Jan 5 10:58:58 GMT 2012 Rank 15 Aligned Residues 202 % Identity 16% Template c2h9qC_ PDB info PDB header:transcription Chain: C: PDB Molecule:hth-type transcriptional regulator catm; PDBTitle: crystal structure of the effector binding domain of a catm2 variant (r156h) Resolution 2.49 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	L	H	I	F	C	S	V	T	A	A	Y	S	H	L	P	P	I	L	D	R	F	R	A	E	H	P	S	V	E	I	K	L	T	T	G	D	A	A	D	A	M	E	K	V	V	T	G	E	A	D	L	A	I	A	G	K	P	E	T	L	P	G	A	V	A	F	S	M	L	E	N	L	A	V	V	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	T	L	R	I	G	Y	V	S	S	L	L	Y	G	L	L	P	E	I	I	Y	L	F	R	Q	Q	N	P	E	I	H	I	E	L	I	E	C	G	T	K	D	Q	I	N	A	L	K	Q	G	K	I	D	L	G	F	G	R	L	K	I	T	D	P	A	I	R	H	I	V	L	H	K	E	Q	L	K	L	A	I
Template Known Secondary structure											G	G	G	G	G	T	T													T	T	S																			T	S		S					S	S				B	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		A	P	A	L	P	C	P	V	R	N	Q	V	S	V	E	K	P	D	W	S	T	V	P	F	I	.	.	M	A	D	Q	G	P	V	R	R	R	I	E	L	W	F	R	R	N	K	I	S	N	P	M	I	Y	A	T	V	G	G	H	E	A	M	V	S	M	V	A	L	G	C	G	V	A	L	L	P	E	V	V	L
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		H	K	H	H	H	L	N	Q	F	A	A	T	G	V	H	L	S	Q	I	I	D	E	P	M	L	L	Y	P	V	S	Q	K	P	N	F	A	T	F	I	Q	S	L	F	T	E	L	G	L	V	P	S	K	L	T	E	I	R	E	I	Q	L	A	L	G	L	V	A	A	G	E	G	V	C	I	V	P	A	S	A	M
Template Known Secondary structure			T	T	S	G	G	G	G	G	T	T	T		B		G	G	G	S	T	T	S								S	S	S	S	S											T	T	T				S	S					S	S											T	S							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	S	P	E	P	V	R	N	R	V	M	I	L	E	R	S	D	E	K	T	P	F	E	L	G	V	C	A	Q	K	K	R	L	H	E	P	L	I	E	A	F	W	K	I	L	P	N	H
Query Conservation
Alig confidence							.	.	.	.																									.
Template Conservation							.	.	.	.																									.
Template Sequence		D	I	G	V	K	.	.	.	.	N	L	L	Y	I	P	I	L	D	D	D	A	Y	S	P	I	S	L	A	V	R	N	M	D	.	H	S	N	Y	I	P	K	I	L	A	C	V	Q	E	V
Template Known Secondary structure		G	S			S	.	.	.	.	S						B			T	T											T	T		.			T
Template Predicted Secondary structure							.	.	.	.																									.
Template SS confidence
		249	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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