Job Description P05827 Confidence 100.00% Date Thu Jan 5 10:58:58 GMT 2012 Rank 3 Aligned Residues 287 % Identity 16% Template c2esnC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	L	R	D	L	K	T	F	L	H	L	A	E	S	R	H	F	G	R	S	A	R	A	M	H	V	S	P	S	T	L	S	R	Q	I	Q	R	L	E	E	D	L	G	Q	P	L	F	V	R	D	N	R	T	V	T	L	T	E	A	G	E	E	L	R	V	F	A	Q	Q	T	L	L	Q	Y	Q	Q	L	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	L	N	L	L	L	V	F	D	A	L	Y	R	H	R	N	V	G	T	A	A	S	E	L	A	I	S	A	S	A	F	S	H	A	L	G	R	L	R	Q	G	L	D	D	E	L	F	L	R	Q	G	N	R	M	Q	P	T	Q	R	A	E	H	L	A	A	A	V	A	A	A	L	R	A	L	G	E	G	L	E
Template Known Secondary structure		S		T	T												S										T	S																T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	I	D	Q	Q	G	P	S	L	S	G	.	E	L	H	I	F	C	S	V	T	A	A	Y	S	H	L	P	P	I	L	D	R	F	R	A	E	H	P	S	V	E	I	K	L	T	T	G	D	A	A	D	A	M	E	K	V	V	T	G	E	A	D	L	A	I	A	G	K	P	E	T	L	P	G	A	V	A	F	S
Query Conservation													.
Alig confidence													.																																																												.
Template Conservation																																																																									.
Template Sequence		E	W	R	P	F	V	P	G	Q	S	Q	R	T	F	V	F	A	A	T	D	Y	T	A	F	A	L	L	P	P	L	M	N	R	L	Q	H	S	A	P	G	V	R	L	R	L	V	N	A	E	R	K	L	S	V	E	A	L	A	S	G	R	I	D	F	A	L	G	Y	D	R	L	.	P	E	G	I	Q	A	H	D
Template Known Secondary structure		T	T	S				T	T	T																														T	T									S	S	S								T	T	S		S									.		T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	N	L	A	V	V	L	I	A	P	A	L	P	C	P	V	R	N	Q	V	S	V	E	K	P	D	W	S	T	V	P	F	I	M	A	D	Q	G	P	V	R	R	R	I	E	L	W	F	R	R	N	K	I	S	N	P	M	I	Y	A	T	V	G	G	H	E	A	M	V	S	M	V	A	L	G	C	G	V
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		W	F	A	D	R	Y	V	V	V	A	R	R	D	H	P	R	L	.	.	.	A	G	A	P	T	L	E	G	Y	L	A	E	R	H	A	V	V	T	P	W	N	E	D	S	G	V	I	D	R	L	L	A	R	S	G	L	R	R	E	V	A	V	Q	L	P	T	V	L	A	A	L	F	L	A	G	S	T	D	F	L
Template Known Secondary structure													T	T		T	T		.	.	.	S	S	S								T	S							T	T			S	S									T	T	T										S											T	S	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	P	E	V	V	L	E	N	S	P	E	P	V	R	N	R	V	M	I	L	E	R	S	D	E	K	T	P	F	E	L	G	V	C	A	Q	K	K	R	L	H	E	P	L	I	E	A	F	W	K	I	L	P	N
Query Conservation
Alig confidence															.	.																											.	.
Template Conservation															.	.																											.	.
Template Sequence		L	T	A	P	R	H	A	A	R	A	L	A	E	.	.	A	A	G	L	A	L	Y	P	A	P	F	D	I	P	P	Y	V	L	R	L	Y	S	H	V	Q	H	.	.	R	D	A	H	A	W	M	I	G	Q	L	K	G
Template Known Secondary structure															.	.			T							S	S													T	T		.	.											T	T	S
Template Predicted Secondary structure															.	.																											.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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