Job Description P05827 Confidence 99.91% Date Thu Jan 5 10:58:58 GMT 2012 Rank 8 Aligned Residues 138 % Identity 15% Template c1b9nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein (mode); PDBTitle: regulator from escherichia coli Resolution 2.09 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	L	R	D	L	K	T	F	L	H	L	A	E	S	R	H	F	G	R	S	A	R	A	M	H	V	S	P	S	T	L	S	R	Q	I	Q	R	L	E	E	D	L	G	Q	P	L	F	V	R	D	N	R	T	V	T	L	T	E	A	G	E	E	L	R	V	F	A	Q	Q	T	L	L	Q	Y	Q	Q	L	R	H
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		A	D	P	R	R	I	S	L	L	K	H	I	A	L	S	G	S	I	S	Q	G	A	K	D	A	G	I	S	Y	K	S	A	W	D	A	I	N	E	M	N	Q	L	S	E	H	I	L	V	E	R	.	A	T	G	A	V	L	T	R	Y	G	Q	R	L	I	Q	L	Y	D	L	L	A	Q	I	Q	Q	K	A	F	D
Template Known Secondary structure																	S	S									T																		T	S						.
Template Predicted Secondary structure																																																				.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		T	I	D	Q	Q	G	P	S	L	S	G	E	L	H	I	F	C	S	V	T	A	.	.	.	.	A	Y	S	H	L	P	P	I	L	D	R	F	R	A	E	H	P	S	V	E	I	K	L	T	T	G	D	A	A	D	A	M	E	K	V	V	T	G	E	A	D	L	A	I	A	G	K	P
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	S	D	D	D	A	L	P	L	N	S	L	L	A	A	I	S	R	F	S	L	Q	T	S	A	R	N	Q	W	F	G	T	I	T	A	R	D	H	D	D	V	Q	Q	H	V	D	V	L	.	.	.	.	.	.	.	.	.	.	L	A	D	G	K	T	R	L	K	V	A	I	T	A
Template Known Secondary structure								S	S		T	T										T				T	T	S											S	S	S	S			S						.	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions