Job Description P37050 Confidence 99.86% Date Thu Jan 5 11:54:41 GMT 2012 Rank 9 Aligned Residues 146 % Identity 17% Template d1pdkb_ SCOP info Common fold of diphtheria toxin/transcription factors/cytochrome f Bacterial adhesins Pilus subunits Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	N	T	C	E	T	R	V	D	G	G	N	K	D	G	L	I	L	L	Q	T	A	T	V	G	E	I	D	A	G	V	L	N	D	T	V	G	A	K	A	K	P	F	S	I	T	V	D	C	S	K	A	N	P	N	P	G	S	T	A	K	M	T	F	G	S	V	F	F	G	N	S	K	G	T	L	N	N
Query Conservation
Alig confidence												.	.																										.	.	.	.																				.
Template Conservation												.	.																										.	.	.	.																				.
Template Sequence		L	L	D	R	P	C	H	V	S	G	.	.	D	S	L	N	K	H	V	V	F	K	T	R	A	S	R	D	F	W	Y	P	P	G	R	S	P	.	.	.	.	T	E	S	F	V	I	R	L	E	N	C	H	A	T	A	V	G	K	I	.	V	T	L	T	F	K	G	T	E	E	A	A	L	P	G	H	L	K	V
Template Known Secondary structure					S	T	T				S	.	.	S	T	T	S														S	S	T	T		B			.	.	.	.										S			T	T	T					.											T	T
Template Predicted Secondary structure												.	.																										.	.	.	.																				.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		D	M	S	I	N	N	P	S	D	G	V	N	I	A	L	H	N	I	D	G	S	T	I	K	Q	V	Q	I	N	N	P	G	D	V	Y	T	K	A	L	D	A	T	T	K	S	A	V	Y	D	F	K	A	S	Y	V	R	A	V	.	.	.	A	D	Q	T	A	T	A	G	Y	V	K	T	N	T	A	Y	T	I	T
Query Conservation																																																												.	.	.
Alig confidence		.	.	.																							.	.	.																															.	.	.
Template Conservation		.	.	.																							.	.	.
Template Sequence		.	.	.	T	G	V	N	A	G	R	L	G	I	A	L	L	D	T	D	G	S	S	L	L	K	.	.	.	P	G	T	S	H	N	K	G	Q	G	E	K	V	T	G	N	S	L	E	L	P	F	G	A	Y	V	V	A	T	P	E	A	L	R	T	K	S	V	V	P	G	D	Y	E	A	T	A	T	F	E	L	T
Template Known Secondary structure		.	.	.	B	S	T	T	B	T	T								T	T	S	S	S	B			.	.	.	T	T	S	B			S	S	T	T		B			T	T	S																		T	T				S	S			B
Template Predicted Secondary structure		.	.	.																							.	.	.
Template SS confidence
					82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		193	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions