 |
Job Description | P37050 | Confidence | 0.96% | Date | Thu Jan 5 11:54:41 GMT 2012 |
Rank | 86 | Aligned Residues | 65 |
% Identity | 6% | Template | c2r76A_ |
PDB info |
PDB header:lipoprotein | Chain: A: PDB Molecule:rare lipoprotein b; |
PDBTitle: crystal structure of the rare lipoprotein b (so_1173) from shewanella2 oneidensis, northeast structural genomics consortium target sor91a
|
Resolution | 2.60 Å |
|
 |
  |   |
127 | . | . | 130 | . | . | . | . | . | |
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . | . |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | A | L | H | N | I | D | G | . |
. |
S | T | I | K | Q | V | Q | I | N | N | P | G | D | V | Y | T | K | A | L | D | A | T | T | K | S | A | V | Y | D | F | K | A | S | Y | V | R | A | V | A | D | Q | T | A | T | A | G | Y | V | K | T | N | T | A | Y | T | I |
Query Conservation |   |
|
|   |
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
N | V | K | I | V | D | A | A | N | D | V | P | V | L | R | L | I | T | D | S | L | E | R | S | T | L | S | L | Y | P | T | G | N | V | A | E | Y | E | L | I | Y | F | V | E | F | A | V | A | L | P | G | K | E | A | Q | P | F | K | I | E | I | R | R | D | Y | L | D |
Template Known Secondary structure |   |
T |
|  |  |
| S | S |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|