Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA70
Confidence11.48%DateThu Jan 5 11:12:04 GMT 2012
Rank16Aligned Residues37
% Identity16%Templated3dtub2
SCOP infoTransmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290.........300......
Predicted Secondary structure 

















Query SS confidence 




































Query Sequence  WLALGVIVFAVVLVTLGKYLFPAKPVVAPVIQDASSE
Query Conservation    
  

  
  
          
           

Alig confidence 




































Template Conservation     
 
 
   
       
            
  

Template Sequence  IAAITIFVTLLILYAVWRFHEKRNKVPARFTHNSPLE
Template Known Secondary structure 
TTT

S






Template Predicted Secondary structure 











Template SS confidence 




































   65....70.........80.........90.........100.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions