Job Description P0AA70 Confidence 68.07% Date Thu Jan 5 11:12:04 GMT 2012 Rank 4 Aligned Residues 230 % Identity 15% Template d1u7ga_ SCOP info Ammonium transporter Ammonium transporter Ammonium transporter Resolution 1.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		L	L	P	L	F	G	A	L	F	A	L	Y	I	I	W	G	S	T	Y	F	V	I	R	I	G	V	E	S	W	P	P	L	M	M	A	G	V	R	F	L	A	A	G	I	L	L	L	A	F	L	L	L	R	G	H	.	.	K	L	P	P	L	R	P	L	L	N	A	A	L	I	G	L	L	L	L	A	V	G	N
Query Conservation																																																									.	.
Alig confidence																		.																																							.	.
Template Conservation																		.
Template Sequence		V	W	L	T	L	S	Y	I	P	I	A	H	X	V	W	G	.	G	G	L	L	A	S	H	G	A	L	D	F	A	G	G	T	V	V	H	I	N	A	A	I	A	G	L	V	G	A	Y	L	I	G	K	R	V	G	F	G	K	E	A	F	K	P	H	N	L	P	X	V	F	T	G	T	A	I	L	Y	I	G	W
Template Known Secondary structure							T										S	.	S							T				S	S		T	T	T	T															S						T	T		S	S			G	G	G
Template Predicted Secondary structure																		.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		G	M	V	T	V	A	E	H	Q	N	V	P	S	G	I	A	A	V	V	V	A	T	V	P	.	.	.	.	.	.	L	F	T	L	C	F	S	R	L	F	G	I	K	T	R	K	L	E	W	V	G	I	A	I	G	L	A	G	I	I	M	L	N	S	G	G	N	L	S	G	N	P	W	G	A	I	L	I	L	I
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																										.	.
Template Conservation																																																									.	.
Template Sequence		F	G	F	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	L	P	S	L	L	G	A	C	S	G	A	I	A	.	.	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V
Template Known Secondary structure							G	G	G	S	S	S	S																														S	S													.	.						T	T	T	T	T	T	S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	I	S	W	A	F	G	S	V	Y	G	S	R	I	T	L	P	V	G	M	M	A	G	A	I	E	M	L	A	A	G	V	V	L	M	I	A	S	M	I	A	G	E	K	L	T	A	L	P	S	L	S	G	.	.	.	.	.	.	.	.	.	.	F	L	A	V	G	Y	L	A	L	F	G	S	I	I	A	I
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	L	A	G	L	W	G	V	T	X	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	X	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	X	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A
Template Known Secondary structure																			S			G	G	G																				T	S	G	G	G	T						T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		228	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	Y	M	Y	L	I	R	N	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	G	Y	K	L	A	D	L	T	V
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions