 |
Job Description | P0CF89 | Confidence | 83.43% | Date | Thu Jan 5 11:31:47 GMT 2012 |
Rank | 249 | Aligned Residues | 41 |
% Identity | 12% | Template | d1yrnb_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | 2.50 |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | T | F | T | A | E | E | K | A | S | V | F | E | L | W | K | N | G | T | G | . |
. |
. |
. |
. |
. |
. |
. |
F | S | E | I | A | N | I | L | G | S | K | P | G | T | I | F | T | M | L | R |
Query Conservation |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
Template Sequence |   |
G | H | R | F | T | K | E | N | V | R | I | L | E | S | W | F | A | K | N | I | E | N | P | Y | L | D | T | K | G | L | E | N | L | M | K | N | T | S | L | S | R | I | Q | I | K | N | W | V | S |
Template Known Secondary structure |   |
T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|