Job Description P0CF89 Confidence 88.21% Date Thu Jan 5 11:31:47 GMT 2012 Rank 185 Aligned Residues 87 % Identity 13% Template c3pvpA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna Resolution 2.30 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	.	.	.	K	M	S	I	R	A	I	A	T	A	L	N	R	S	P	S	T	I	S	R	E	V	Q	R	N	R	G	R	R	Y	Y	K	A	V	D
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.
Template Conservation
Template Sequence		I	S	A	A	T	I	M	A	A	T	A	E	Y	F	D	T	T	V	E	E	L	R	G	P	G	K	T	R	A	L	A	Q	S	R	Q	I	A	M	Y	L	C	R	E	L	T	D	L	S	L	P	K	I	G	Q	A	F	G	R	D	H	T	T	V	M	Y	A	Q	R	K	I	L	S	E	M	A	E	R	R	E	V
Template Known Secondary structure															T	T								S	S																																T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		109	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	N	R	A	N	R	M	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	H	V	K	E	L	T	T	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions