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Job DescriptionP0CF89
Confidence99.35%DateThu Jan 5 11:31:47 GMT 2012
Rank18Aligned Residues290
% Identity10%Templatec3hosA_
PDB info PDB header:transferase, dna binding protein/dnaChain: A: PDB Molecule:transposable element mariner, complete cds; PDBTitle: crystal structure of the mariner mos1 paired end complex with mg
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30 .........40.... .....50.........60.........70.....
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Query Sequence  AEEKASVFELWKNGTGFSEIANIL. . . . . . . GSKPGTIFTMLRDT. . . . GGIKPHERKRAVAHLTLSEREEIRAGLSAKM
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Template Sequence  EQTRTVLIFCFHLKKTAAESHRMLVEAFGEQVPTVKTCERWFQRFKSGDFDVDDKEHGKPPKRYEDAELQAL. LDEDDAQ
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   910.........20.........30.........40.........50.........60.........70.........80 .......
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  SIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRT
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Template Sequence  TQKQLAEQLEVSQQAVSNRLREMGKIQ. . . . . . . . . . . . . . . KVGRWVPHELNERQMERRKNTCEILLSRYKRKSFLHRI
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TTTTS
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   88.90.........100.........110.... .....120.........130.........140.........150..
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  KPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWE
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Template Sequence  VTGDEKWIF. . . . . . . . . . . . . . . . . . . . . . . . . . . FVNPKRKKSYVDPGQPATSTARPNRF. . . . . . . . . . . . . . . . . .
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   153......160. ........170.........180.......
 
   236...240.........250.........260....... ..270.........280.........290.........300 .......
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Query Sequence  GDLVSGTKNSHIATLVDRKSRYTIILRLRGKD. . . . . . SVSVNQALTDKFLSLPSELRKSLTWDRGMELAR. . HLEFTVS
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Template Sequence  . . . . . . GKKTMLCVWWDQSGVIYYELLKPGETVNAARYQQQLINLNRALQRKR. PEYRVIFLHDNAPSHTARAVRDTLET
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   188.190.........200.........210.........220.........230.... .....240.........250.........260
 
   308.310.........320.........330.........340.........350.........360......
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Query Sequence  TGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTL
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Template Sequence  LNWEVLPHAAYSPDLAPSDYHLFASMGHAL. AEQRFDS. YESVKKWLDEWFAAKDDEFY
Template Known Secondary structure  T





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   266...270.........280.........290..... ....300.. .......310.........320..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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