Job Description P0CF89 Confidence 96.23% Date Thu Jan 5 11:31:47 GMT 2012 Rank 40 Aligned Residues 69 % Identity 14% Template c2jmlA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna binding domain/transcriptional regulator; PDBTitle: solution structure of the n-terminal domain of cara repressor Resolution UNK

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.											.	.	.								.
Query SS confidence																																				.											.	.	.								.
Query Sequence		T	G	F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	.	A	V	A	H	L	T	L	S	E	R	.	.	.	E	E	I	R	A	G	L	.	S	A	K	M	S	I	R	A	I	A	T	A	L	N	R	S	P	S
Query Conservation																																				.											.	.	.								.
Alig confidence																																				.											.	.	.								.
Template Conservation
Template Sequence		L	R	I	R	T	I	A	R	M	T	G	I	R	E	A	T	L	R	A	W	E	R	R	Y	G	F	P	R	P	L	R	S	E	G	N	N	Y	R	V	Y	S	R	E	E	V	E	A	V	R	R	V	A	R	L	I	Q	E	E	G	L	S	V	S	E	A	I	A	Q	V	K	T	E	P	P
Template Known Secondary structure										T	T	S	T	T											T			S			B	S	S	S		S	S	S																					T	S	T												S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions