Job Description P0CF89 Confidence 90.88% Date Thu Jan 5 11:31:47 GMT 2012 Rank 155 Aligned Residues 66 % Identity 15% Template c2ewtA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of the dna-binding domain of bldd Resolution 1.81 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																		.																.	.
Query SS confidence																		.																.	.
Query Sequence		M	R	R	T	F	T	A	E	E	K	A	S	V	F	E	L	.	W	K	N	G	T	G	F	S	E	I	A	N	I	L	G	.	.	S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	K	M	S	I
Query Conservation																		.																.	.
Alig confidence																		.																.	.										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	S	E	Y	A	K	Q	L	G	A	K	L	R	A	I	R	T	Q	Q	G	L	S	L	H	G	V	E	E	K	S	Q	G	R	W	K	A	V	V	V	G	S	Y	.	.	E	R	G	D	R	A	V	T	V	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure																					T	T										T	T	T	S	S									.	.			T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.																								.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	I	A	T	A	L	N	R	S	P	S	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	L	A	D	F	Y	G	V	P	V	Q	E	L
Template Known Secondary structure									T	S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions