Job Description P0CF89 Confidence 99.22% Date Thu Jan 5 11:31:47 GMT 2012 Rank 19 Aligned Residues 98 % Identity 16% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		R	R	T	F	T	A	E	E	K	A	S	V	F	E	L	W	K	N	G	T	G	F	S	E	I	A	N	I	L	G	S	K	P	G	T	I	F	T	M	L	R	D	T	G	G	I	K	P	H	E	R	K	R	A	V	A	H	L	T	L	S	E	R	E	E	I	R	A	G	L	S	A	.	K	M	S	I	R	A	I
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		G	S	A	L	S	D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I
Template Known Secondary structure		S																	T	T											T												S	G	G	G	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		A	T	A	L	N	.	.	R	S	P	S	T	I	S	R	E	V	Q	R	N	R
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		R	N	E	L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S	G
Template Known Secondary structure					T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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