 |
Job Description | P0ACJ8 | Confidence | 95.07% | Date | Thu Jan 5 11:18:19 GMT 2012 |
Rank | 155 | Aligned Residues | 43 |
% Identity | 28% | Template | d1jhfa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| LexA repressor, N-terminal DNA-binding domain
|
Resolution | 1.80 |
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . | . | . |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
K | I | T | R | Q | E | I | G | Q | I | V | G | C | . |
S | R | E | T | V | G | R | I | L | K | M | L | E | D | Q | N | L | I | S | A | H | G | K | . |
. |
. |
T | I | V | V | Y | G | T |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|
|   | . |
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   | . | . | . |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |   |
Template Sequence |   |
P | P | T | R | A | E | I | A | Q | R | L | G | F | R | S | P | N | A | A | E | E | H | L | K | A | L | A | R | K | G | V | I | E | I | V | S | G | A | S | R | G | I | R | L | L | Q | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |
| S | S | S | S | S |
|  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|