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Job DescriptionP0ACJ8
Confidence99.18%DateThu Jan 5 11:18:19 GMT 2012
Rank53Aligned Residues104
% Identity27%Templatec3uknC_
PDB info PDB header:transport protein, membrane proteinChain: C: PDB Molecule:novel protein similar to vertebrate potassium voltage-gated PDBTitle: structure of the c-linker/cnbhd of zelk channels in c 2 2 21 space2 group
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  LGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQE
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Template Sequence  LFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVL. . . . . . . . KVLAILGKGDLIGSDSLTQVIK.
Template Known Secondary structure  GGSS

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   620.........630.........640.........650.........660........ .670.........680.........690
 
   83......90.........100.........110.....
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Query Sequence  RSAWVRAKTACEVAEISYKKFRQLIQVNPDILM
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Template Sequence  TNANVKALTYCDLQYISLKGLREVLRLYPEYAQ
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   696...700.........710.........720........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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