Job Description P0ACJ8 Confidence 99.29% Date Thu Jan 5 11:18:19 GMT 2012 Rank 44 Aligned Residues 118 % Identity 24% Template c3otfA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium/sodium hyperpolarization-activated cyclic PDBTitle: structural basis for the camp-dependent gating in human hcn4 channel Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	P	Q	T	D	P	T	L	E	W	F	L	S	H	C	H	I	H	K	Y	P	S	K	S	T	L	I	H	Q	G	E	K	A	E	T	L	Y	Y	I	V	K	G	S	V	A	V	L	I	K	D	E	E	G	K	E	M	I	L	S	Y	L	N	Q	G	D	F	I	G	E	L	G	L	F	E	E	G	Q	E
Query Conservation
Alig confidence																																																											.	.	.	.	.														.
Template Conservation																																																											.	.	.	.	.														.
Template Sequence		L	F	A	N	A	D	P	N	F	V	T	S	M	L	T	K	L	R	F	E	V	F	Q	P	G	D	Y	I	I	R	E	G	T	I	G	K	K	M	Y	F	I	Q	H	G	V	V	S	V	L	T	K	G	N	K	E	T	K	.	.	.	.	.	L	A	D	G	S	Y	F	G	E	I	C	L	L	.	T	R	G	R
Template Known Secondary structure					T	S										T	T								T	T						T	T	S																		S	S	S					.	.	.	.	.			T	T										.			S
Template Predicted Secondary structure																																																											.	.	.	.	.														.
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.						.	.	.	.	.	.	.	.	660	.	.	.	.		.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	A	W	V	R	A	K	T	A	C	E	V	A	E	I	S	Y	K	K	F	R	Q	L	I	Q	V	N	P	D	I	L	M	R	L	S	A	Q	M	A	R	R	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	A	S	V	R	A	D	T	Y	C	R	L	Y	S	L	S	V	D	N	F	N	E	V	L	E	E	Y	P	M	M	R	R	A	F	E	T	V	A	L	D	R	L	D
Template Known Secondary structure			S	S					S	S																				G	G	G
Template Predicted Secondary structure
Template SS confidence
		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions