Job Description P0ACJ8 Confidence 99.49% Date Thu Jan 5 11:18:19 GMT 2012 Rank 34 Aligned Residues 118 % Identity 18% Template c3mdpA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:cyclic nucleotide-binding domain (cnmp-bd) protein; PDBTitle: crystal structure of a putative cyclic nucleotide-binding protein2 (gmet_1532) from geobacter metallireducens gs-15 at 1.90 a resolution Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	P	Q	T	D	P	T	L	E	W	F	L	S	H	C	H	I	H	K	Y	P	S	K	S	T	L	I	H	Q	G	E	K	A	E	T	L	Y	Y	I	V	K	G	S	V	A	V	L	I	K	D	E	E	G	K	E	M	I	L	S	Y	L	N	Q	G	D	F	I	G	E	L	G	L	F	E	E	G	Q	E
Query Conservation
Alig confidence																																																			.	.	.	.	.	.																					.
Template Conservation																																																			.	.	.	.	.	.																					.
Template Sequence		F	F	A	S	L	T	D	E	Q	L	K	D	I	A	L	I	S	E	E	K	S	F	P	T	G	S	V	I	F	K	E	N	S	K	A	D	N	L	X	L	L	L	E	G	G	V	E	L	F	.	.	.	.	.	.	Y	S	S	T	V	C	S	V	V	P	G	A	I	F	G	V	S	S	L	I	.	K	P	Y	H
Template Known Secondary structure					T	S											T								T	T						T	T	S	B										S						.	.	.	.	.	.										T	T					G	G	G	S	S	.	T	T		B
Template Predicted Secondary structure																																																			.	.	.	.	.	.																					.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	A	W	V	R	A	K	T	A	C	E	V	A	E	I	S	Y	K	K	F	R	Q	L	I	Q	V	N	P	D	I	L	M	R	L	S	A	Q	M	A	R	R	L	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	S	S	A	R	A	T	K	P	V	R	V	V	D	I	N	G	A	R	L	R	E	X	S	E	N	N	Q	A	L	G	Q	V	L	X	N	N	V	A	A	A	V	L	A
Template Known Secondary structure			S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions