Job Description P0ACJ8 Confidence 99.95% Date Thu Jan 5 11:18:19 GMT 2012 Rank 12 Aligned Residues 193 % Identity 19% Template c3e6dA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: crystal structure of cprk c200s Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	T	D	P	T	L	E	W	F	L	S	H	C	H	I	H	K	Y	P	S	K	S	T	L	I	H	Q	G	E	K	A	E	T	L	Y	Y	I	V	K	G	S	V	A	V	L	I	K	D	E	E	G	K	E	M	I	L	S	Y	L	N	Q	G	D	F	I	G	E	L	G	L	F	E	E	G	Q	E	R	S	A
Query Conservation
Alig confidence																																																																										.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		F	F	P	I	E	K	L	R	N	Y	T	Q	M	G	L	I	R	D	F	A	K	G	S	A	V	I	M	P	G	E	E	I	T	S	M	I	F	L	V	E	G	K	I	K	L	D	I	I	F	E	D	G	S	E	K	L	L	Y	Y	A	G	G	N	S	L	I	G	K	L	Y	P	T	.	.	.	.	G	N	N	I
Template Known Secondary structure						G	G	G	G	G	G	G	G	G	S							T	T						T	T												S									T	T	S										T	T						S	S			.	.	.	.	S
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	R	A	K	T	A	C	E	V	A	E	I	S	Y	K	K	F	R	Q	L	I	Q	V	N	P	D	I	L	M	R	L	S	A	Q	M	A	R	R	L	Q	V	T	S	E	K	V	G	N	L	A	F	L	D	V	T	G	R	I	A	Q	T	L	L	N	L	A	K	Q	P	D	A	M	T	H	P	D	G	M	Q
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		Y	A	T	A	M	E	P	T	R	T	C	W	F	S	E	K	S	L	R	T	V	F	R	T	D	E	D	M	I	F	E	I	F	K	N	Y	L	T	K	V	A	Y	Y	A	R	Q	V	P	T	I	R	I	L	R	L	F	Y	E	L	C	S	S	Q	G	K	R	.	.	.	.	.	.	V	G	D	T	Y	E	I	T
Template Known Secondary structure						S	S	S																			T																																									.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	I	T	R	Q	E	I	G	Q	I	V	G	C	S	R	E	T	V	G	R	I	L	K	M	L	E	D	Q	N	L	I	S	A	H	G	K	T	I	V	V	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	L	S	Q	K	S	I	G	E	I	T	G	V	H	H	V	T	V	S	R	V	L	A	S	L	K	R	E	N	I	L	D	K	K	K	N	K	I	I	V	Y	N
Template Known Secondary structure																														T	T	S					T	T					S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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