Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACJ8
Confidence99.73%DateThu Jan 5 11:18:19 GMT 2012
Rank20Aligned Residues136
% Identity18%Templatec3dn7A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:cyclic nucleotide binding regulatory protein; PDBTitle: cyclic nucleotide binding regulatory protein from cytophaga2 hutchinsonii.
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQE
Query Conservation 
   

   
  
           

 
   
      
 
  
 
        
          
   
          
Alig confidence 















































































Template Conservation   
  

   
  
           
  
   
        
  
 
        
          
   
          
Template Sequence  KFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYXAFQKQQP
Template Known Secondary structure  TTS


TT

TT

TTSB

S
TTS
TT


T
B
Template Predicted Secondary structure 






































Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   83......90.........100.........110.........120.........130........
Predicted Secondary structure 










Query SS confidence 























































Query Sequence  RSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFL
Query Conservation                                                          
Alig confidence 























































Template Conservation      
 
     
  
       
    
          
      
 
      
Template Sequence  ADFYIQSVENCELLSITYTEQENLFERIPALERYFRLVYQKSFAAAQLRSKFQHXY
Template Known Secondary structure 
SSSS

TT
Template Predicted Secondary structure 









Template SS confidence 























































   91........100.........110.........120.........130.........140......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions