Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACJ8
Confidence96.34%DateThu Jan 5 11:18:19 GMT 2012
Rank97Aligned Residues73
% Identity21%Templatec3deuB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator slya; PDBTitle: crystal structure of transcription regulatory protein slya2 from salmonella typhimurium in complex with salicylate3 ligands
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180.........190......
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  LSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNL
Query Conservation                                 
                 
  
   

  

 

 



 
  
   
 
Alig confidence 









































.........




























Template Conservation 
   
              
   


  
  

  
      ......... 
  


    
    

  
  
   

Template Sequence  LGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPD. . . . . . . . . QSQIQLAKAIGIEQPSLVRTLDQLEDKGL
Template Known Secondary structure  TGGGT

TS
SS.........B
TS
TTS
Template Predicted Secondary structure 







.........







Template SS confidence 















































































   6...10.........20.........30.........40....... ..50.........60.........70......
 
   197.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  IS
Query Conservation 
 
Alig confidence 

Template Conservation 
 
Template Sequence  IS
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 

   77.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions