Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACJ8
Confidence96.03%DateThu Jan 5 11:18:19 GMT 2012
Rank115Aligned Residues85
% Identity8%Templatec3boqB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.........180.........190.
Predicted Secondary structure 















Query SS confidence 















































































Query Sequence  DILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKML
Query Conservation                                      
                 
  
   

  

 

 



 
  
Alig confidence 










































............
























Template Conservation   
   
      
       
    


  
  

  
     ............  
  


        


  
 

Template Sequence  RLWLNILRLHGLVFGDLNRQLLDETGLSLAKFDAXAQLARNPD. . . . . . . . . . . . GLSXGKLSGALKVTNGNVSGLVNRL
Template Known Secondary structure  S


TT............

SS

S
Template Predicted Secondary structure 




............





Template SS confidence 















































































   16...20.........30.........40.........50........ .60.........70.........80...
 
   192.......200........
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  EDQNLISAHGKTIVVYG
Query Conservation     
 
      
 
 
Alig confidence 
















Template Conservation 
  
 
 

   
 

 
Template Sequence  IKDGXVVKASFSAKLTD
Template Known Secondary structure  TTSB





B
Template Predicted Secondary structure 






Template SS confidence 
















   84.....90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions