Job Description P0ACJ8 Confidence 99.35% Date Thu Jan 5 11:18:19 GMT 2012 Rank 39 Aligned Residues 118 % Identity 19% Template c2ptmA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hyperpolarization-activated (ih) channel; PDBTitle: structure and rearrangements in the carboxy-terminal region of spih2 channels Resolution 1.93 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	P	Q	T	D	P	T	L	E	W	F	L	S	H	C	H	I	H	K	Y	P	S	K	S	T	L	I	H	Q	G	E	K	A	E	T	L	Y	Y	I	V	K	G	S	V	A	V	L	I	K	D	E	E	G	K	E	M	I	L	S	Y	L	N	Q	G	D	F	I	G	E	L	G	L	F	E	E	G	Q	E
Query Conservation
Alig confidence																																																								.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		F	F	V	G	A	D	S	N	F	V	T	R	V	V	T	L	L	E	F	E	V	F	Q	P	A	D	Y	V	I	Q	E	G	T	F	G	D	R	M	F	F	I	Q	Q	G	I	V	D	I	I	M	S	D	G	V	.	.	.	.	I	A	T	S	L	S	D	G	S	Y	F	G	E	I	C	L	L	T	R	E	R	R
Template Known Secondary structure		G	G	T	T																				T	T						T	T	S			S															T	T	S		.	.	.	.							T	T				S							S	S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.					.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	A	W	V	R	A	K	T	A	C	E	V	A	E	I	S	Y	K	K	F	R	Q	L	I	Q	V	N	P	D	I	L	M	R	L	S	A	Q	M	A	R	R	L
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		V	A	.	S	V	K	C	E	T	Y	C	T	L	F	S	L	S	V	Q	H	F	N	Q	V	L	D	E	F	P	A	M	R	K	T	M	E	E	I	A	V	R	R	L
Template Known Secondary structure		S	S	.					S	S																																T
Template Predicted Secondary structure				.
Template SS confidence
		621	.		.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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