 |
Job Description | P0ACJ8 | Confidence | 30.75% | Date | Thu Jan 5 11:18:19 GMT 2012 |
Rank | 495 | Aligned Residues | 43 |
% Identity | 12% | Template | c2plyB_ |
PDB info |
PDB header:translation/rna | Chain: B: PDB Molecule:selenocysteine-specific elongation factor; |
PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna.
|
Resolution | 2.60 Å |
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | |
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | R | Q | E | I | G | Q | I | V | . |
. |
G | C | S | R | E | T | V | G | R | I | L | K | M | L | E | D | Q | N | L | I | S | A | H | G | K | T | I | V | V | Y | G | T | R |
Query Conservation |   |
  |
|   |   |   |
|
|   |   |
| . | . |
|   |
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
L | A | R | E | E | L | R | S | R | Y | F | S | R | L | P | A | R | V | Y | Q | A | L | L | E | E | W | S | R | E | G | R | L | Q | L | A | A | N | T | V | A | L | A | G | F | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
| S | S |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
464 | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|