Job Description P0ACJ8 Confidence 40.55% Date Thu Jan 5 11:18:19 GMT 2012 Rank 454 Aligned Residues 25 % Identity 36% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		167	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		K	I	T	R	Q	E	I	G	Q	I	V	.	.	.	.	.	G	C	S	R	E	T	V	G	R	I	L	K	M	L
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		P	Y	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V	A	K	Y	R	E	M	L
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions