Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACJ8
Confidence77.82%DateThu Jan 5 11:18:19 GMT 2012
Rank283Aligned Residues27
% Identity30%Templatec1l9uH_
PDB info PDB header:transcriptionChain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   167..170.........180.... .....190...
Predicted Secondary structure 




....
Query SS confidence 

















. . . .








Query Sequence  KITRQEIGQIVGCSRETV. . . . GRILKMLED
Query Conservation    
   

  

 

 

....

 
  
  
Alig confidence 

















....








Template Conservation    

 


  



 






 


 


 
Template Sequence  EHTLEEVGAYFGVTRERIRQIENKALRKLKY
Template Known Secondary structure 


TTS
S
Template Predicted Secondary structure 





Template SS confidence 






























   395....400.........410.........420.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions