Job Description P0AEX7 Confidence 96.78% Date Thu Jan 5 11:24:33 GMT 2012 Rank 1 Aligned Residues 265 % Identity 14% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	L	Y	F	L	Q	Q	M	F	N	G	V	T	L	G	S	T	Y	A	L	I	A	I	G	Y	T	M	V	Y	G	I	I	G	M	I	N	F	A	H	G	E	V	Y	M	I	G	S	Y	V	S	F	M	I	I	A	A	L	M	M	M	G	I	D	T	G	W	L	L	V	A	A	G	F	V	G	A	I	V	I
Query Conservation
Alig confidence																																	.														.
Template Conservation																																	.														.
Template Sequence		V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E	.	N	P	L	A	E	P	G	L	L	G	V	S	N	.	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T
Template Known Secondary structure					T																											T	.		T	T			T	T	T	T	T				.												T	S		T	T
Template Predicted Secondary structure																																	.														.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	Y	G	W	S	I	E	R	V	A	Y	R	P	V	R	N	S	K	R	L	I	A	L	I	S	A	I	G	M	S	I	F	L	Q	N	Y	V	S	L	T	E	G	S	R	D	V	A	L	P	S	L	F	N	G	Q	W	V	V	G	H	S	E	N	F	S	A	S	I	T	T	M	Q	A	V	I	W	I	V
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		L	I	L	L	R	F	A	.	.	.	.	.	.	.	.	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W	A	.	.	.	.	.	I	Y	F	S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A
Template Known Secondary structure									.	.	.	.	.	.	.	.			T																									.	.	.	.	.																	T				T	T			G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		T	F	L	A	M	L	A	L	T	I	F	I	R	Y	S	R	M	G	R	A	C	R	A	C	A	E	D	L	K	M	A	S	L	L	G	I	N	T	D	R	V	I	A	L	T	F	V	I	G	A	A	M	A	A	V	A	G	V	L	L	G	Q	.	.	F	Y	G	V	I	N	P	Y	I	G	F	M	A	G	M	K
Query Conservation																																																																.	.
Alig confidence												.	.	.	.	.	.																																															.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		L	I	P	V	L	L	W	I	C	C	.	.	.	.	.	.	Q	S	R	P	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T	G	W	X	V	G	V	S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T
Template Known Secondary structure												.	.	.	.	.	.																		T	T																														S	S	S	S									T	T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		A	F	T	A	A	V	L	G	G	I	G	S	I	P	G	A	M	I	G	G	L	I	L	G	I	A	E	A	L	S	S	A	Y	.	.	.	.	.	L	S	T	E	Y	K	D	V	V	S	F	A	L	L	I	L	V	L	L	V	M
Query Conservation																																			.	.	.	.	.
Alig confidence				.	.	.	.	.	.																										.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		D	H	.	.	.	.	.	.	R	V	L	L	P	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V	V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K
Template Known Secondary structure		S		.	.	.	.	.	.																									S		S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		271	.							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions