Job Description P0AEX7 Confidence 4.70% Date Thu Jan 5 11:24:33 GMT 2012 Rank 13 Aligned Residues 216 % Identity 9% Template c3k3gA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:urea transporter; PDBTitle: crystal structure of the urea transporter from desulfovibrio vulgaris2 bound to 1,3-dimethylurea Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	F	L	Y	F	L	Q	Q	M	F	N	G	V	T	L	G	S	T	Y	A	L	I	A	I	G	Y	T	M	V	Y	G	I	I	G	M	I	N	F	A	H	G	E	V	Y	M	I	G	S	Y	V	S	F	M	I	I	A	A	L	M	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		N	P	L	I	E	F	C	D	S	V	C	R	G	C	G	Q	V	M	F	Q	N	N	T	V	T	G	L	L	F	F	A	G	.	I	F	Y	N	S	T	T	L	G	V	C	A	V	L	G	T	A	A	S	T	L	T	A	Q	L	L	G	V	D	K	P	L	V	R	A	G	L	F	G	F	N	G	T	L	A	G	I
Template Known Secondary structure																	G	G	G	T														.																											T								T	T	T	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
					65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	I	D	T	G	W	L	L	V	A	A	G	F	V	G	A	I	V	I	A	S	A	Y	G	W	S	I	E	R	V	A	Y	R	P	V	R	N	S	K	R	L	I	A	L	I	S	A	I	G	M	S	I	F	L	Q	N	Y	V	S	L	T	E	G	S	R	D	V	A	L	P	S	L	F	N	G	Q	W
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	L	P	F	F	F	N	Y	E	P	A	M	L	G	Y	V	A	L	N	G	A	F	T	T	I	I	M	A	S	L	L	N	F	L	G	K	W	G	V	P	A	L	T	A	P	F	V	L	A	T	W	L	L	M	F	G	V	Y	K	L	S	L	F	H	P	G	A	L	I	A	P	A	L	P	S	V	D	M	G	T
Template Known Secondary structure							B				T	T																								G	G	G	T				T	T												G	G	G	G	T		T	T	S		B		T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		V	V	G	H	S	E	N	F	S	A	S	I	T	T	M	Q	A	V	I	W	I	V	T	F	L	A	M	L	A	L	T	I	F	I	R	Y	S	R	M	G	R	A	C	R	A	C	A	E	.	.	D	L	K	M	A	S	L	L	G	I	N	T	D	R	V	I	A	L	T	F	V	I	G	A	A	M	A	A	V	A
Query Conservation																																																		.	.
Alig confidence																																																		.	.
Template Conservation
Template Sequence		V	T	G	R	T	F	M	E	G	L	F	K	G	V	G	E	V	M	F	Q	D	N	I	V	T	G	V	I	F	V	V	A	I	L	V	N	S	R	I	S	A	L	F	A	V	I	G	S	L	V	G	L	C	T	A	L	I	M	H	S	P	E	T	P	V	R	L	G	L	Y	G	F	N	S	V	L	C	G	I	A
Template Known Secondary structure																	G	G	G	T																																							T	T								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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