Return to main results Retrieve Phyre Job Id

Job DescriptionP76063
Confidence86.40%DateThu Jan 5 12:18:02 GMT 2012
Rank101Aligned Residues38
% Identity21%Templatec3mkzU_
PDB info PDB header:dna-binding protein/dnaChain: U: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-272)-18mer complex, p21 form
Resolution2.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.... .....20.........30.........40.....
Predicted Secondary structure  ..










Query SS confidence 







. .






























Query Sequence  SFKQACAV. . VGGQSAMARLLGVSPPSVNQWIKGVRQLPAE
Query Conservation 

 


  .. 



 


 




  



  
   



Alig confidence 







..

























.



Template Conservation   
   
      

  

   
 


 


 


  .

  
Template Sequence  RYASRLQNEFAGNISALADAENISRKIITRCINTAK. LPKS
Template Known Secondary structure  TT
TTT

T.S
Template Predicted Secondary structure 







.

Template SS confidence 








































   166...170.........180.........190.........200. ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions