Job Description P76063 Confidence 90.71% Date Thu Jan 5 12:18:02 GMT 2012 Rank 82 Aligned Residues 56 % Identity 9% Template c3fymA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus Resolution 1.00 Å

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		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure													.																														.	.	.	.	.	.
Query SS confidence													.																														.	.	.	.	.	.
Query Sequence		Y	S	F	K	Q	A	C	A	V	V	G	.	G	Q	S	A	M	A	R	L	L	G	V	S	P	P	S	V	N	Q	W	I	K	G	V	R	Q	L	P	A	E	.	.	.	.	.	.	R	C	P	A	I	E	R	A	T	R	G	E	V	L	C	E	E	L
Query Conservation													.																														.	.	.	.	.	.
Alig confidence													.																														.	.	.	.	.	.											.	.
Template Conservation																																																											.	.
Template Sequence		E	A	L	K	G	R	R	E	R	L	G	M	T	L	T	E	L	E	Q	R	T	G	I	K	R	E	M	L	V	H	I	E	N	N	E	F	D	Q	L	P	N	K	N	Y	S	E	G	F	I	R	K	Y	A	S	V	V	N	.	.	I	E	P	N	Q	L
Template Known Secondary structure											T	T																						T	T		G	G	G	S	S	S	G	G	G												T	T	.	.
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions