Return to main results Retrieve Phyre Job Id

Job DescriptionP76063
Confidence97.99%DateThu Jan 5 12:18:02 GMT 2012
Rank14Aligned Residues45
% Identity22%Templatec2ebyA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; PDBTitle: crystal structure of a hypothetical protein from e. coli
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60...
Predicted Secondary structure 














Query SS confidence 














































Query Sequence  GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL
Query Conservation 


 


 




  



  
   



    

 

 
 

  

Alig confidence 






































..





Template Conservation 

 


   


   

  
 
   

   
 


  
 ..

   
Template Sequence  KINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFD. . TTVDFW
Template Known Secondary structure 
TS
TTSS


T..

Template Predicted Secondary structure 









..

Template SS confidence 














































   33......40.........50.........60.........70. ......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions