Return to main results Retrieve Phyre Job Id

Job DescriptionP06615
Confidence99.92%DateThu Jan 5 10:59:13 GMT 2012
Rank5Aligned Residues209
% Identity16%Templated1p7da_
SCOP infoDNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core
Resolution2.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGA
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Template Sequence  AKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIY. . . . . . . . QAAESSPCWLRLAMELAVVTGQ
Template Known Secondary structure  TTS
S

TTTTS












........GGGS


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   140.........150.........160.........170.........180......... 190.........200.........210.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT
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Template Sequence  RVGDLCEMKWSDIVDGYLYVEQSKTGVKIAI. . . . . . . . . . . . . . PTALHIDALGISMKETLDKCK. . . . . . . . EILGGE
Template Known Secondary structure 
TT
BGGGB
SS
TTT

..............TT
TTTT........T
SS
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   212.......220.........230.........240.. .......250.........260... ......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF
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Template Sequence  TIIASTRREPLSSGTVSRYFMRARKASGLSFEG. . DPPTFHELRSLSAR. LYEKQISDKFAQHLLGHKSDTMASQRDDRG
Template Known Secondary structure  BSSB
TTS
B

T


SS..S


TT.T


SS








TT
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   270.........280.........290.........300.. .......310...... ...320.........330.........340......
 
   242.
Predicted Secondary structure 
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Query Sequence  AL
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Template Conservation   
Template Sequence  RE
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 

   348.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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