Job Description P06615 Confidence 99.93% Date Thu Jan 5 10:59:13 GMT 2012 Rank 3 Aligned Residues 175 % Identity 29% Template d1a0pa2 SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.50

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		K	Y	L	L	A	P	E	V	S	A	L	L	H	Y	V	.	.	.	.	.	P	D	L	H	R	K	M	L	L	A	T	L	W	N	T	G	A	R	I	N	E	A	L	A	L	T	R	G	D	F	S	L	A	P	P	Y	P	F	V	Q	L	A	T	L	K	Q	R	T	E	K	A	A	R	T	A	G	R	M	P	A
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	L	S	E	A	Q	V	E	R	L	L	Q	A	P	L	I	D	Q	P	L	E	L	R	D	K	A	M	L	E	V	L	Y	A	T	G	L	R	V	S	E	L	V	G	L	T	M	S	D	I	S	L	R	Q	G	V	V	R	V	I	G	K	G	N	K	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																S		T	T	S																								T	T		B	G	G	G			T	T	T	T							S	S	S					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	Q	T	H	R	L	V	P	L	S	D	S	W	Y	V	S	Q	L	Q	T	M	V	A	Q	L	K	I	P	M	E	R	R	N	R	R	T	G	R	T	E	K	A	R	I	W	E	V	T	D	R	T	V	R	T	W	I	G	E	A	V	A	A	A	A	A	D	G	V	T	F	S	V	P	V	T	P	H	T	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																																															.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	P	L	G	E	E	A	V	Y	W	L	E	T	Y	L	E	H	G	R	P	W	L	L	N	G	V	S	I	D	V	L	F	P	S	Q	R	A	Q	Q	M	T	R	Q	T	F	W	H	R	I	K	H	Y	A	V	L	A	G	I	D	S	E	K	.	.	.	.	L	S	P	H	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.																		T						T	T					B	S	S	B		T	T	S	S	B																	T	T			G	G	G	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																															.	.	.	.
Template SS confidence
										179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	S	Y	A	M	H	M	L	Y	A	G	I	P	L	K	V	L	Q	S	L	M	G	H	K	S	I	S	S	T	E	V	Y	T	K	V	F	A	L	D	V	A	A	R	H	R
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		R	H	A	F	A	T	H	L	L	N	H	G	A	D	L	R	V	V	Q	M	L	L	S	D	L	S	.	.	T	T	Q	I	Y	T	H	V	A	T	E	R	L	R	Q	L	H	Q
Template Known Secondary structure														S	S		G	G	G	S	S							.	.
Template Predicted Secondary structure																												.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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