Return to main results Retrieve Phyre Job Id

Job DescriptionP76046
Confidence82.06%DateThu Jan 5 12:17:49 GMT 2012
Rank341Aligned Residues124
% Identity22%Templatec3zvrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of dynamin
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.. .......20 .........30.........40... ...... 50.........60.........70
Predicted Secondary structure 
....


...




.



..














Query SS confidence 











. . . .







. . .






















.





. .




















Query Sequence  MKRLKNELNALV. . . . NRGVDRHL. . . RLAVTGLSRSGKTAFITAMVNQL. LNIHAG. . ARLPLLSAVREERLLGVKRIP
Query Conservation     
        .... 
  
   ...



















  
.
     ..  

 
      

  

   
Alig confidence 











....







...






















.





..




















Template Conservation     

  

 
 
 
   
    
 




















 
  




 
 


 
 

 
            
Template Sequence  MEDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLH
Template Known Secondary structure  GGGTTT

GGG

S
TTT
SS

S

SSS
S
SS

SS

ST
Template Predicted Secondary structure 

































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   71........80.........90.........100.........110.........120.........130......
Predicted Secondary structure 
































Query SS confidence 

































































Query Sequence  QRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPG
Query Conservation 
 
  



 

     
    
 

 

  


 

 

               

 







Alig confidence 




..


























..







........













Template Conservation       ..  
   
   
        
  
 

 ..  
 


 ........

    







Template Sequence  CKGKK. . FTDFEEVRLEIEAETDRVTGTNKGISP. . VPINLRVY. . . . . . . . SPHVLNLTLVDLPG
Template Known Secondary structure  TTT

..B


STT


S..

........TT

S


Template Predicted Secondary structure 




..










..

........







Template SS confidence 

































































   86...90 .........100.........110....... ..120..... ....130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions