Job Description P76046 Confidence 86.32% Date Thu Jan 5 12:17:49 GMT 2012 Rank 245 Aligned Residues 100 % Identity 17% Template c3r7wC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:gtp-binding protein gtr1; PDBTitle: crystal structure of gtr1p-gtr2p complex Resolution 2.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	Y	C	E	K	V	V	K	G	F	Y	K	N	H	F	L	R	F	D	R	Q	I	V	L	V	D	C	L	Q	P	L	N	S	G	P	Q	A	F	N	D	M	R	L	A	L	T	Q	L	M	Q	S	F	H	Y	G	Q	R	T	L	F	R	R	L	F	S	P	V	I	D	K	L	L	F	A	A	T	K	A	D
Query Conservation
Alig confidence																																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		D	V	F	X	E	N	Y	F	T	K	Q	K	D	H	I	F	Q	X	V	Q	V	L	I	H	V	F	D	V	E	S	T	E	.	.	V	L	K	D	I	E	I	F	A	K	A	L	K	Q	L	R	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	D	A	.	K	I	F	V	L	L	H	K	X	D
Template Known Secondary structure										T	T	T						T	T										T	T		T	T	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		.									T	T
Template Predicted Secondary structure																																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.														.	.	.	.		120	.	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	T	I	D	Q	H	A	N	M	V	S	L	L	Q	Q	L	I	Q	D	A	W	Q	N	A	A	F	E	G	I	S	M	D	C	L	G	L	A
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		L	V	Q	L	D	K	R	E	E	L	F	Q	I	X	X	K	N	L	S	E	T	S	S	E	F	G	F	.	.	P	N	L	I	G	F	P	T	S
Template Known Secondary structure		S	S																						T	T	T		.	.		S
Template Predicted Secondary structure																													.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions