Job Description P76537 Confidence 7.32% Date Thu Jan 5 12:24:07 GMT 2012 Rank 37 Aligned Residues 99 % Identity 8% Template c3nahC_ PDB info PDB header:transferase Chain: C: PDB Molecule:rna dependent rna polymerase; PDBTitle: crystal structures and functional analysis of murine norovirus rna-2 dependent rna polymerase Resolution 2.75 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.			.	.	.
Predicted Secondary structure																																																															.	.													.	.
Query SS confidence																																																															.	.													.	.
Query Sequence		M	K	T	A	N	G	N	V	V	R	F	F	E	V	M	K	G	D	N	V	A	M	V	I	N	G	D	Q	G	T	I	S	R	I	D	V	L	D	S	D	I	P	A	D	T	G	V	K	I	G	T	P	F	S	D	L	Y	S	K	A	F	.	.	G	N	C	Q	K	A	D	G	D	D	N	R	.	.	A	V	E
Query Conservation																																																															.	.													.	.
Alig confidence																																											.																				.	.													.	.
Template Conservation																																											.
Template Sequence		Y	E	M	G	K	S	M	R	P	I	Y	T	A	A	L	K	D	E	L	V	K	P	D	K	I	Y	G	K	I	K	K	R	L	L	W	G	S	D	L	G	T	.	M	I	R	A	A	R	A	F	G	P	F	C	D	A	L	K	E	T	C	I	F	N	P	I	R	V	G	M	S	M	N	E	D	G	P	F	I	F
Template Known Secondary structure				T	T																		T					S	S														.																		T	T	T	T	S	S	B		T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	A	E	G	S	Q	H	I	S	Y	Q	F	S	G	E	W	R	G	P	E	G	L	M	P	S	D
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		A	R	H	A	N	F	R	.	.	.	Y	H	M	D	A	D	Y	T	R	W	D	S	T	Q	Q	R	A
Template Known Secondary structure						T	S	S	.	.	.								S	S		G	G	G
Template Predicted Secondary structure									.	.	.
Template SS confidence
		233	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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