Return to main results Retrieve Phyre Job Id

Job DescriptionP76537
Confidence16.06%DateThu Jan 5 12:24:07 GMT 2012
Rank11Aligned Residues8
% Identity63%Templatec1javA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:transmembrane glycoprotein (gp41); PDBTitle: average nmr solution structure of the trp-rich peptide of2 hiv gp41 bound to dpc micelles
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.....
Predicted Secondary structure 




Query SS confidence 









Query Sequence  WSAANPWNWF
Query Conservation 

 
 
  

Alig confidence 



..



Template Conservation 



..



Template Sequence  WASL. . WNWF
Template Predicted Secondary structure 

..
Template SS confidence 









   2... ....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions