Job Description P37596 Confidence 99.74% Date Thu Jan 5 11:55:42 GMT 2012 Rank 105 Aligned Residues 238 % Identity 16% Template d1y0pa2 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain Resolution 1.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V
Query Conservation
Alig confidence																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	D	V	V	V	V	G	S	G	G	A	G	F	S	A	A	I	S	A	T	D	S	G	A	.	.	K	V	I	L	I	E	K	E	P	V	I	G	G	N	A	K	L	A	A	G	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S							S													T	T		.	.							S	S	S	S	S		T	T	G	G	G			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	D	A	E	A	R	V	V	K	S	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	A	W	T	D	Q	Q	K	A	K	K	I	T	D	S	P	E	L	M	F	E	D	T	M	K	G	G	Q	N	I	N	D	P	A	L	V	K	V	L	S	S	H	S	K	D	S	V	D	W	M	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S							T	T																T	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																														173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query Sequence		R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	.	.	.	.	.	.	.	.	.	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	.	.	.	.	.	.	G	I	Q	A	T	L	D	R	Q	R	N	I
Query Conservation																			.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		A	M	G	A	D	L	T	D	V	G	M	M	G	G	A	S	V	N	R	A	H	R	P	T	G	G	A	G	V	G	A	H	V	V	Q	V	L	Y	D	N	A	V	K	R	N	I	D	L	R	M	N	T	R	G	I	E	V	L	K	D	D	K	G	T	V	K	G	I	L	V	K	G	M	Y	K	G	Y	Y	W	V
Template Known Secondary structure			T	T										T	T		S	S						S	T	T	T																		T	T					S	S										T	T	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		227	.	.	230	.	.	.	.	.	.																								.	.	.	240	.					.	.	.	.	.	.	.			.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.								.	.								.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.								.	.								.	.	.	.
Query Sequence		E	V	D	A	V	I	A	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	P	E	T	.	.	.	.	A	L	A	R	R	A	G	.	.	L	T	I	N	R	G	V	.	.	.	.	C	V	D	S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.								.	.								.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.								.	.								.	.	.	.
Template Conservation
Template Sequence		K	A	D	A	V	I	L	A	T	G	G	F	A	K	N	N	E	R	V	A	K	L	D	P	S	L	K	G	F	I	S	T	N	Q	P	G	A	V	G	D	G	L	D	V	A	E	N	A	G	G	A	L	K	D	M	Q	Y	I	D	T	K	A	E	V	M	N	A	K	K	Q	V	I	P	G	L	Y	G	A	G	E
Template Known Secondary structure				S										T	T										G	G	G	T	T					S		T	T		S	S									T	T						T	T				T	T						T	T	S										S	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		274	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		C	A	E	I	N	G	.	.	.	.	Q	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.
Template Conservation
Template Sequence		V	T	G	G	V	H	G	A	N	R	L	G	G	N	A	I	S	D	I	I	T	F	G	R	L	A	G	E	E	A	A
Template Known Secondary structure		T			S	S	S	T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions