Job Description P37596 Confidence 99.55% Date Thu Jan 5 11:55:42 GMT 2012 Rank 120 Aligned Residues 234 % Identity 17% Template d1jnra2 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain Resolution 1.60

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	.	.	.	.	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	.	.	.	.	.	.	.	.	.	.	.	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G
Query Conservation																									.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.				.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		V	E	T	D	I	L	I	I	G	G	G	F	S	G	C	G	A	A	Y	E	A	A	Y	W	A	K	L	G	G	L	.	.	K	V	T	L	V	E	K	A	A	V	E	R	S	G	A	V	A	Q	G	L	S	A	I	N	T	Y	I	D	L	T	G	R	S	E	R	Q	N	T	L	E	D	Y	V	R	Y	V	T	L
Template Known Secondary structure					S							S															T	T	T	T		.	.							S	S		T	T	T		S	T	T	T	T						S					S	S	S	S	B	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
																								66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	M	M	G	L	A	R	E	D	L	V	A	D	Y	A	R	H	V	D	G	T	V	H	L	F	E	K	W	G	L	P	I	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T																								T	T			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	T	P	D	G	K	Y	V	R	E	G	Q	W	Q	I	M	I	H	G	E	S	Y	K	P	I	I	A	E	A	A	K	M	A	V	G	E	E	N	I	Y	E	R	V	F	I	F	E	L	L	K	D	N	N	D	P	N	.	.	.	.	.	.	.	A	V	A	G	A	V	G	F	S	V
Template Known Secondary structure		.	.	.	.	.	.	.	B		T	T	S		B		B	S	S	S	S							T	T															G	G	G				S										T	T		T	T	.	.	.	.	.	.	.	B									S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.
Template SS confidence
									132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																													.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	L	Q	G	L	E	K	T	D	S	G	I	Q	A	T	L	D	R	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L	A	R	R	A	G	L	T	I	N	R	G	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																																			.
Template Sequence		R	E	P	K	F	Y	V	F	K	A	K	A	V	I	L	A	T	G	G	A	T	L	L	F	R	P	R	S	T	G	E	A	A	G	R	T	W	Y	A	I	F	D	T	G	S	G	Y	Y	M	G	L	K	A	G	A	M	L	T	Q	A	G	F	W	V	C	.	G	P	E	D	L	M	P	E	E	Y	A	K	L	F
Template Known Secondary structure		S	S	S								S									B		S	S	S			S			S	G	G	G	G			S	S		T	T		B	S										T												.			T	T	T							T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	D	S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		P	L	K	Y	N	R	M	T	T	V	K	G	L	F	A	I	G	D	C	A	G	A	N	P	H	K	F	S	S	G	.	.	S	F	T	E	G	R	I	A	A	K	A	A	V
Template Known Secondary structure		S	S			T	T	B		S	S	B	T					G	G	G	B		S									.	.
Template Predicted Secondary structure																																.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.			.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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