Job Description P37596 Confidence 99.22% Date Thu Jan 5 11:55:42 GMT 2012 Rank 167 Aligned Residues 194 % Identity 16% Template c3ps9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of mnmc from e. coli Resolution 2.54 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		S	N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	.	.	.	.	.	.	.	.	.	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		K	R	E	A	A	I	I	G	G	G	I	A	S	A	L	L	S	L	A	L	L	R	R	G	W	.	.	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	L	L	S	K	H	D	E	A	L	N	R	F	F	S	N	A	F	T	F	A	R	R	F	Y	D	Q	L	P
Template Known Secondary structure											S												T	T	T		.	.							S	S	S	S	S	S		S	T	T			S										S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template Sequence		V	K	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	W	C	G	V	T	Q	L	G	W	D	E	K	S	Q	H	K	I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	A	V	E	A	N	A	V	E	Q	I	T	G	V	A	T	N	C	S	G	I	T	Y	P	Q	G	G	W	.
Template Known Secondary structure		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S												T	S				T	T	T														S	S			S	S						T	T				.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template SS confidence
		342	.	.	.																.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	G	I	Q	A	T	L	D	R	Q	R	N	I	E	V	D	A	V	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	P	A	E	L	T	R	N	V	L	E	L	A	Q	Q	Q	G	L	Q	I	Y	Y	Q	Y	Q	L	Q	N	F	S	R	K	D	D	C	W	L	L	N	F	A	G	D	Q	Q	A	T	H	S	V	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T						S										T	T							T	T	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																													406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	T	G	L	R	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	N	G	H	Q	I	S
Template Known Secondary structure					G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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