Job Description P37596 Confidence 100.00% Date Thu Jan 5 11:55:42 GMT 2012 Rank 13 Aligned Residues 354 % Identity 23% Template c3oc4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, pyridine nucleotide-disulfide family; PDBTitle: crystal structure of a pyridine nucleotide-disulfide family2 oxidoreductase from the enterococcus faecalis v583 Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	I	I	G	A	S	F	A	G	I	S	A	A	I	A	S	R	K	K	Y	P	Q	A	E	I	S	L	I	D	K	Q	A	T	V	G	Y	L	S	G	R	Y	I	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	R	R	Q	K	I	Q	L	L	L	N	R	E	V	V	A
Template Known Secondary structure									S															S	S	S							S	S	S			S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T						S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		84	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		I	D	A	E	A	R	V	V	.	.	.	.	K	S	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																																									.	.
Template Conservation																																																						.	.
Template Sequence		X	D	V	E	N	Q	L	I	A	W	T	R	K	E	E	Q	Q	W	Y	S	Y	D	K	L	I	L	A	T	G	A	S	Q	F	S	T	Q	I	R	G	S	Q	T	E	K	L	L	K	Y	K	F	L	S	.	.	A	V	P	L	L	E	N	S	Q	T	V	A	V	I	G	A	G	P	I	G	X	E	A	I	D	F
Template Known Secondary structure				T	T	T	T							T	T								S										B						B	T	T	T		T	T				G	G	G			.	.							T		S								S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	G	I	Q	A	T	L	D	R	Q	R	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		L	V	K	X	K	K	T	V	H	V	F	E	S	L	E	N	L	L	P	K	Y	F	D	K	E	X	V	A	E	V	Q	K	S	L	E	K	Q	A	V	I	F	H	F	E	E	T	V	L	G	I	E	E	T	A	N	G	I	.	V	L	E	T	S	E	Q	E	I	S	C	D	S	G	I	F	A	L	N	L	H	P
Template Known Secondary structure					T	T								S	S	S	S	S	S	T	T	T															T	T	T						T										S	S			.					S	S						S						S			B
Template Predicted Secondary structure																																																											.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280							.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure										.																																		.	.	.	.	.	.
Query SS confidence										.																																		.	.	.	.	.	.
Query Sequence		E	T	A	L	A	R	R	A	.	G	L	T	I	N	R	G	V	C	V	D	S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	.	.	.	.	.	.	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L	G	N	N	T	P	L	K	L	P	A	M	L
Query Conservation										.																																		.	.	.	.	.	.
Alig confidence										.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	A	Y	L	D	K	K	I	Q	R	N	L	D	Q	T	I	A	V	D	A	Y	L	Q	T	S	V	P	N	V	F	A	I	G	D	C	I	S	V	X	N	E	P	V	A	E	T	F	Y	A	P	L	V	N	N	A	V	R	T	G	L	V	V	A	N	N	L	E	E	K	T	H	R	F	I	G	S	L	R	T
Template Known Secondary structure				S	S			T	T	S		B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B					G	G	G	T																			T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.															340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.													.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.													.
Query Sequence		V	K	I	K	T	P	E	L	P	L	H	L	A	G	E	T	Q	R	Q	D	L	R	W	Q	I	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Q	G	M	V	A	R	G	V	D	D	A	.	D	Q	L	R	A	F	V	V	S	E	D	R	.	M	K	E	A	F	G	L	L	K	T	L	P
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.													.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.													.									.
Template Conservation																																																																														.
Template Sequence		X	G	T	K	V	G	D	Y	Y	L	A	S	T	G	L	T	E	T	E	G	L	F	F	P	Q	T	L	A	S	I	I	V	R	Q	P	A	P	P	L	Q	H	G	T	E	I	L	G	K	L	I	Y	D	K	V	T	Q	R	V	L	G	A	Q	L	C	S	K	N	N	C	L	E	K	I	N	T	L	.	A	L	S
Template Known Secondary structure							T	T										S	G	G	G	G	G	S	S	S												T	T	T	T		S											T	T	T		B									S	S			T							.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.
		377
Predicted Secondary structure
Query SS confidence
Query Sequence		M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		402

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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