Job Description P37596 Confidence 100.00% Date Thu Jan 5 11:55:42 GMT 2012 Rank 21 Aligned Residues 361 % Identity 15% Template c2v6oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin glutathione reductase; PDBTitle: structure of schistosoma mansoni thioredoxin-glutathione2 reductase (smtgr) Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	.	.	.	.	.	.	.	.	D	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.											.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		Y	D	L	I	V	I	G	G	G	S	G	G	L	A	A	G	K	E	A	A	K	Y	G	A	.	.	K	T	A	V	L	D	Y	V	E	P	T	P	I	G	T	T	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	G	L	L	S	H	A	L	E	D	A	E	H	F	G	W	S	L
Template Known Secondary structure										S													T	T		.	.												T	T						T	T							S																							T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
						42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																									.	.
Query SS confidence		.	.	.	.																																																									.	.
Query Sequence		.	.	.	.	N	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	Q	N	N	Q	.	.	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P
Query Conservation		.	.	.	.																																																									.	.
Alig confidence		.	.	.	.																																																									.	.
Template Conservation
Template Sequence		D	R	S	K	I	S	H	N	W	S	T	M	V	E	G	V	Q	S	H	I	G	S	L	N	W	G	Y	K	V	A	L	R	D	N	Q	V	T	Y	L	N	A	K	G	R	L	I	S	P	H	E	V	Q	I	T	D	K	N	Q	K	V	S	T	I	T	G	N	K	I	I	L	A	T	G	E	R	P	K	Y	P	E
Template Known Secondary structure				T	T																														T	T						S					S	S	S	S							T	T																							S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	R	E	L	M	L	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E
Query Conservation
Alig confidence											.	.	.	.	.																																																.	.
Template Conservation											.	.	.	.	.																																																.	.
Template Sequence		I	P	G	A	V	E	Y	G	I	.	.	.	.	.	T	S	D	D	L	F	S	L	P	Y	F	P	G	K	T	L	V	I	G	A	S	Y	V	A	L	E	C	A	G	F	L	A	S	L	G	G	D	V	T	V	M	V	R	S	I	L	L	.	.	R	G	F	D	Q	Q	M	A	E	K	V	G	D	Y	M	E	N
Template Known Secondary structure		S	T	T						B	.	.	.	.	.						T	T		S	S				S							S													T	T								S	S		S	S	.	.	T	T	S														T
Template Predicted Secondary structure											.	.	.	.	.																																																.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.														.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.			.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.									.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.									.	.
Query Sequence		M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	A	T	L	D	R	Q	R	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L	.	.	A	R	R	A	G	L	T	I	.	.	N	R	G	V	C	V	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.									.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.									.	.
Template Conservation
Template Sequence		H	G	V	K	F	A	K	L	C	V	P	D	E	I	K	Q	L	K	V	V	D	T	E	N	N	K	P	G	L	L	L	V	K	G	H	Y	T	D	G	K	K	F	E	E	E	F	E	T	V	I	F	A	V	G	R	E	P	Q	L	S	K	V	L	C	E	T	V	G	V	K	L	D	K	N	G	R	V	V	C	T
Template Known Secondary structure		T	T					T	T													B	T	T	T	T	B											T	T	S								S						S						T	T	T	T	B		T	T	S				B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																															.																																.	.	.
Query SS confidence																																															.																																.	.	.
Query Sequence		S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L	G	N	N	.	T	P	L	K	L	P	A	M	L	V	K	I	K	T	P	E	L	P	L	H	L	A	G	E	T	Q	R	Q	D	L	R	.	.	.
Query Conservation																																															.																																.	.	.
Alig confidence																						.	.	.																							.													.																			.	.	.
Template Conservation																						.	.	.																																				.
Template Sequence		D	D	E	Q	T	T	V	S	N	V	Y	A	I	G	D	I	N	A	G	K	.	.	.	P	Q	L	T	P	V	A	I	Q	A	G	R	Y	L	A	R	R	L	F	A	G	A	T	E	L	T	D	Y	S	N	V	A	T	T	V	.	F	T	P	L	E	Y	G	A	C	G	L	S	E	E	D	A	I	E	K	Y	G
Template Known Secondary structure		T	T		B		S	S	T	T					G	G	G	B	T	T	S	.	.	.																				S									T	T						.		S	S	S
Template Predicted Secondary structure																						.	.	.																																				.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.				.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
																			335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	I	N	T	E	R	Q	G	M	V	A	R	G	V	D	D	.	.	A	D	Q	L	R	A	F	V	V	S	E	D	R	M	K	E	A	F	G	L	L	K	T	L	P	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																						.
Template Conservation																																																											.
Template Sequence		D	K	D	I	E	V	Y	H	S	N	F	K	P	L	E	W	T	V	A	H	R	E	D	N	V	C	Y	M	K	L	V	C	R	K	S	D	N	M	R	V	L	G	L	H	V	L	G	P	N	A	G	E	I	T	Q	G	Y	.	A	V	A	I
Template Known Secondary structure		G	G	G																T	T			S	S										T	T	T	T	T									S	T	T									.
Template Predicted Secondary structure																																																											.
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.		.	.	.	.