Job Description P37596 Confidence 100.00% Date Thu Jan 5 11:55:42 GMT 2012 Rank 41 Aligned Residues 354 % Identity 21% Template c2r9zB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione amide reductase; PDBTitle: glutathione amide reductase from chromatium gracile Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																																		.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	P	D	L	S	H
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		H	F	D	L	I	A	I	G	G	G	S	G	G	L	A	V	A	E	K	A	A	A	F	G	K	.	.	R	V	A	L	I	E	S	K	A	L	G	G	T	C	V	N	V	G	C	V	P	K	K	V	M	W	Y	A	S	H	L	A	E	A	V	R	D	A	P	G	F	G	V	Q	A	S	G	T	L	D	W	P	R
Template Known Secondary structure											S													T	T		.	.							S	S		T	T							S																				G	G	G	G	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	T	L	N	S	Q
Query Conservation
Alig confidence																																												.	.	.																																.	.	.	.
Template Conservation																																												.	.	.																																.	.	.	.
Template Sequence		L	V	A	G	R	D	R	Y	I	G	A	I	N	S	F	W	D	G	Y	V	E	R	L	G	I	T	R	V	D	G	H	A	R	F	V	D	A	H	T	I	E	V	.	.	.	E	G	Q	R	L	S	A	D	H	I	V	I	A	T	G	G	R	P	I	V	P	R	L	P	G	A	E	L	G	I	T	.	.	.	.
Template Known Secondary structure																								T	T						S							T	T					.	.	.	T	T																				S		T	T	G	G	G	S	B		.	.	.	.
Template Predicted Secondary structure																																												.	.	.																																.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G
Query Conservation
Alig confidence		.	.																																																	.
Template Conservation		.	.																																																	.
Template Sequence		.	.	S	D	G	F	F	A	L	Q	Q	Q	P	K	R	V	A	I	I	G	A	G	Y	I	G	I	E	L	A	G	L	L	R	S	F	G	S	E	V	T	V	V	A	L	E	D	R	L	L	F	.	Q	F	D	P	L	L	S	A	T	L	A	E	N	M	H	A	Q	G	I	E	T	H	L	E	F	A	V	A	A
Template Known Secondary structure		.	.								S	S			S								S													T	T								S	S	S	S	S	S	T	.	T	S																T					S	S
Template Predicted Secondary structure		.	.																																																	.
Template SS confidence
				156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																	.																							.	.	.	.
Query SS confidence																	.																							.	.	.	.
Query Sequence		L	E	K	T	D	S	G	I	Q	A	T	L	D	R	Q	.	R	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L	A	R	.	.	.	.	R	A	G	L	T	I	N	R	G	V	C	V	D	S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	P
Query Conservation																	.																							.	.	.	.
Alig confidence																	.																							.	.	.	.																																	.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		L	E	R	D	A	Q	G	T	T	L	V	A	Q	D	G	T	R	L	E	G	F	D	S	V	I	W	A	V	G	R	A	P	N	T	R	D	L	G	L	E	A	A	G	I	E	V	Q	S	N	G	M	V	P	T	D	A	Y	Q	N	T	N	V	P	G	V	Y	A	L	G	D	I	T	G	R	.	.	.	.	D	Q
Template Known Secondary structure						T	T							T	T			B				B	S						S					S		T	T	S						T					T	T	S						T	T	S	B		S	S	T	T					G	G	G	G	S	S	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.																			.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L	G	N	N	.	.	T	P	L	K	L	P	A	M	L	V	K	I	K	T	P	E	L	P	L	H	L	A	G	E	T	Q	R	Q	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	Q	I	N	T	E	R	Q	G
Query Conservation																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		L	T	P	V	A	I	A	A	G	R	R	L	A	E	R	L	F	D	G	Q	S	E	R	K	L	D	Y	D	N	I	P	T	V	V	.	F	A	H	P	P	L	S	K	V	G	L	S	E	P	E	A	R	E	R	L	G	D	V	L	T	V	Y	E	T	S	F	T	P	M	R	Y	A	L	N	E	H	G	P	K	T
Template Known Secondary structure																			S			T	T						S	S						.			S	S																S		S												G	G	G	T	T	S	S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		344	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		M	V	A	R	G	V	D	.	D	A	D	Q	L	R	A	F	V	V	S	E	D	R	M	K	E	A	F	G	L	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		A	M	K	L	V	C	A	G	P	E	Q	R	V	V	G	V	H	V	I	G	D	G	A	D	E	M	L	Q	G	F
Template Known Secondary structure									T	T	T	T									S	T	T					S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions